miRBase entry: cfa-mir-381

Stem-loop cfa-mir-381

Accession

MI0010390

Description

Canis familiaris cfa-mir-381 precursor miRNA

Sequence

uacuuaaagcgagguugcccuuuguauauucgguuuauugacauagaaUAUACAAGGGCAAGCUCUCUGUgagua
((((((.((.(((.((((((((.((((((((.(((....)))...)))))))))))))))).))).)).))))))

Structure

      a  c   g        u        --g   u 
uacuua ag gag uugcccuu guauauuc   guu a
|||||| || ||| |||||||| ||||||||   |||  
augagU UC CUC AACGGGAA CAUAUaag   cag u
      G  U   G        -        aua   u

Annotation confidence Not enough data

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Genome context

chr8: 69274983-69275057 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from cfa-mir-381

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-381

Accession	MIMAT0009891
Description	Canis familiaris cfa-miR-381 mature miRNA
Sequence	49 - UAUACAAGGGCAAGCUCUCUGU - 70
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39