Stem-loop cfa-mir-324

Accession

MI0010395

Description

Canis lupus familiaris cfa-mir-324 precursor miRNA

Literature search

4 open access papers mention cfa-mir-324
(4 sentences)

Sequence

24617 reads, 46.0 reads per million, 80 experiments

CGCAUCCCCUAGGGCAUUGGUGUggagcuggagacccACUGCCCCAGGUGCUGCUGGggguuguaguc
.(((.(((((((((((((((.(.(.((.(((....))))).))))).))))).))))))).)))....

Structure

---C   U       -     -   U U g  c   a 
    GCA CCCCUAG GGCAU UGG G g ag ugg g
    ||| ||||||| ||||| ||| | | || |||  
    ugu gggGGUC UCGUG ACC C C UC Acc a
cuga   u       G     G   - - G  -   c 

Annotation confidence Medium

Genome context

5: 32297890-32297957 [-]

Mature cfa-miR-324-5p

• Accession: MIMAT0009896
• Description: Canis lupus familiaris cfa-miR-324-5p mature miRNA
• Sequence: 1 - CGCAUCCCCUAGGGCAUUGGUGU - 23
• Evidence: not_experimental

Mature cfa-miR-324-3p

• Accession: MIMAT0051936
• Description: Canis lupus familiaris cfa-miR-324-3p mature miRNA
• Sequence: 38 - ACUGCCCCAGGUGCUGCUGG - 57
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39