Stem-loop cfa-mir-325

Accession

MI0010396

Description

Canis lupus familiaris cfa-mir-325 precursor miRNA

Literature search

2 open access papers mention cfa-mir-325
(4 sentences)

Sequence

5189 reads, 25.0 reads per million, 42 experiments

agugcuugguuCCUAGUAGGUGUUCAGUAAGUGUuugugacauaauucgUUUAUUGAGCACCUCCUAUCAAUcaagcacugugcuaggcucugg
(((((((((((..(((.((((((((((((((((..(........)..)))))))))))))))).)))..)))))))))))..............

Structure

--------------           CC   U                Uu gug 
              agugcuugguu  UAG AGGUGUUCAGUAAGUG  u   a
              |||||||||||  ||| ||||||||||||||||  |    
              ucacgaacUAA  AUC UCCACGAGUUAUUUgc  a   c
ggucucggaucgug           CU   C                uu aua 

Annotation confidence High

Genome context

X: 60682433-60682526 [-]

Mature cfa-miR-325-5p

• Accession: MIMAT0009897
• Description: Canis lupus familiaris cfa-miR-325-5p mature miRNA
• Sequence: 12 - CCUAGUAGGUGUUCAGUAAGUGU - 34
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-325-3p

• Accession: MIMAT0051937
• Description: Canis lupus familiaris cfa-miR-325-3p mature miRNA
• Sequence: 50 - UUUAUUGAGCACCUCCUAUCAAU - 72
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39