Stem-loop cfa-mir-329b

Accession

MI0010398

Description

Canis lupus familiaris cfa-mir-329b precursor miRNA

Literature search

1 open access papers mention cfa-mir-329b
(1 sentences)

Sequence

2603 reads, 15.0 reads per million, 65 experiments

gguaccugaagaGAGGUUUUCUGGGUUUCUGUUUCUuuaaugaggaugaAACACACCUGGUUAACCUCUUuuccaguauc
(((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..)))))

Structure

     cu           UU      UUC      U  aa 
gguac  gaagaGAGGUU  CUGGGU   UGUUUC uu  u
|||||  |||||||||||  ||||||   |||||| ||   
cuaug  cuuUUCUCCAA  GGUCCA   ACAAag ag  g
     ac           UU      --C      u  ga 

Annotation confidence High

Genome context

8: 69540238-69540317 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cfa-mir-329b

Mature cfa-miR-329b-5p

• Accession: MIMAT0051939
• Description: Canis lupus familiaris cfa-miR-329b-5p mature miRNA
• Sequence: 13 - GAGGUUUUCUGGGUUUCUGUUUCU - 36
• Evidence: not_experimental

Mature cfa-miR-329b-3p

• Accession: MIMAT0009899
• Description: Canis lupus familiaris cfa-miR-329b-3p mature miRNA
• Sequence: 50 - AACACACCUGGUUAACCUCUU - 70
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39