miRBase entry: cfa-mir-329b

Stem-loop cfa-mir-329b

Accession

MI0010398

Description

Canis familiaris cfa-mir-329b precursor miRNA

Sequence

gguaccugaagagagguuuucuggguuucuguuucuuuaaugaggaugaAACACACCUGGUUAACCUCUUUuccaguauc
(((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..)))))

Structure

     cu           uu      uuc      u  aa 
gguac  gaagagagguu  cugggu   uguuuc uu  u
|||||  |||||||||||  ||||||   |||||| ||   
cuaug  cuUUUCUCCAA  GGUCCA   ACAAag ag  g
     ac           UU      --C      u  ga

Annotation confidence Not enough data

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Genome context

chr8: 69258528-69258607 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cfa-mir-329b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-329b

Accession	MIMAT0009899
Description	Canis familiaris cfa-miR-329b mature miRNA
Sequence	50 - AACACACCUGGUUAACCUCUUU - 71
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39