Stem-loop cfa-mir-483

Accession

MI0010400

Description

Canis lupus familiaris cfa-mir-483 precursor miRNA

Literature search

3 open access papers mention cfa-mir-483
(5 sentences)

Sequence

1439 reads, 9.0 reads per million, 55 experiments

gAGGACGGGAGGAAAGGAGGACGUGguuucaugcagguccUCACUCCUCCCCUCCCGUCUUCcucuucc
((((((((((((..((((((((.((........)).))))....))))..)))))))))))).......

Structure

-------            AA    ----    G  guu 
       gAGGACGGGAGG  AGGA    GGAC UG   u
       ||||||||||||  ||||    |||| ||    
       CUUCUGCCCUCC  UCCU    ccug ac   c
ccuucuc            CC    CACU    g  gua 

Annotation confidence High

Genome context

18: 46977865-46977933 [-]

Mature cfa-miR-483-5p

• Accession: MIMAT0051941
• Description: Canis lupus familiaris cfa-miR-483-5p mature miRNA
• Sequence: 2 - AGGACGGGAGGAAAGGAGGACGUG - 25
• Evidence: not_experimental

Mature cfa-miR-483-3p

• Accession: MIMAT0009901
• Description: Canis lupus familiaris cfa-miR-483-3p mature miRNA
• Sequence: 41 - UCACUCCUCCCCUCCCGUCUUC - 62
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39