Stem-loop cfa-mir-582

Accession

MI0010415

Description

Canis lupus familiaris cfa-mir-582 precursor miRNA

Literature search

2 open access papers mention cfa-mir-582
(2 sentences)

Sequence

7789 reads, 20.0 reads per million, 76 experiments

acucuuuggUUACAGUUGUUCAACCAGUUACUaaucuagcuaauugUAACCAGUUGAACAACUGAACCCaaagggugcaaa
(((((((((...((((((((((((..(((((..............)))))..))))))))))))...))))))))).....

Structure

-----         UUA            CA     Uaaucu 
     acucuuugg   CAGUUGUUCAAC  GUUAC      a
     |||||||||   ||||||||||||  |||||       
     ugggaaaCC   GUCAACAAGUUG  CAAUg      g
aaacg         CAA            AC     uuaauc 

Annotation confidence High

Genome context

2: 46981261-46981341 [-]

Mature cfa-miR-582-5p

• Accession: MIMAT0009916
• Description: Canis lupus familiaris cfa-miR-582-5p mature miRNA
• Sequence: 10 - UUACAGUUGUUCAACCAGUUACU - 32
• Evidence: not_experimental

Mature cfa-miR-582-3p

• Accession: MIMAT0051953
• Description: Canis lupus familiaris cfa-miR-582-3p mature miRNA
• Sequence: 47 - UAACCAGUUGAACAACUGAACCC - 69
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39