Stem-loop cfa-mir-615

Accession

MI0010419

Description

Canis lupus familiaris cfa-mir-615 precursor miRNA

Literature search

1 open access papers mention cfa-mir-615
(1 sentences)

Sequence

1028 reads, 10.0 reads per million, 53 experiments

ucgggaggggcgggagGGGGGUCCCCGGAGCUCGGUCUcgagggugcuuauuguucggUCCGAGCCCGGGUCUCCCUCUcccccc
......((((.((((((((((..(((((.((((((.(.((((.(.......).))))).))))))))))))))))))))))))).

Structure

ucggga    c          UC     A      U U    g ug 
      gggg gggagGGGGG  CCCGG GCUCGG C cgag g  c
      |||| ||||||||||  ||||| |||||| | |||| |  u
      cccc cUCUCCCUCU  GGGCC CGAGCC g gcuu u  u
-----c    -          --     -      U -    g ua 

Annotation confidence High

Genome context

27: 1232280-1232364 [-]

Mature cfa-miR-615-5p

• Accession: MIMAT0009920
• Description: Canis lupus familiaris cfa-miR-615-5p mature miRNA
• Sequence: 17 - GGGGGUCCCCGGAGCUCGGUCU - 38
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-615-3p

• Accession: MIMAT0051954
• Description: Canis lupus familiaris cfa-miR-615-3p mature miRNA
• Sequence: 59 - UCCGAGCCCGGGUCUCCCUCU - 79
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39