miRBase entry: cfa-mir-653

Stem-loop cfa-mir-653

Accession

MI0010423

Description

Canis familiaris cfa-mir-653 precursor miRNA

Sequence

ucauuccuucaGUGUUGAAACAAUCUCUAUUGaaccaggcuccaaaccaaguucacuggaguuuguuucaauauugcaagaaugauaagau
((((((...((((((((((((((.(((((.(((((..((.......))..))))).))))).))))))))))))))...))))))......

Structure

------      cuu              U     U     ca  cu 
      ucauuc   caGUGUUGAAACAA CUCUA UGaac  gg  c
      ||||||   |||||||||||||| ||||| |||||  ||  c
      aguaag   guuauaacuuuguu gaggu acuug  cc  a
uagaau      aac              u     c     aa  aa

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 18979467-18979557 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-653

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-653

Accession	MIMAT0009924
Description	Canis familiaris cfa-miR-653 mature miRNA
Sequence	12 - GUGUUGAAACAAUCUCUAUUG - 32
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39