miRBase entry: cfa-mir-758

Stem-loop cfa-mir-758


Accession
MI0010424
Description
Canis lupus familiaris cfa-mir-758 precursor miRNA


Sequence

9197 reads, 38.0 reads per million, 69 experiments
cuggguacaugagAUGGUUGACCAGAGAGCACACGcuuuauuugugccgUUUGUGACCUGGUCCACUAACccucaguaucu
..((((((.((((.((((.((((((.(.(((.((((.........).))).)))..))))))).))))...))))))))))

Structure
cu      a    --A    U      A -A   C   - uuu 
  ggguac ugag   UGGU GACCAG G  GCA ACG c   a
  |||||| ||||   |||| |||||| |  ||| ||| |   u
  ucuaug acuc   AUCA CUGGUC C  UGU Ugc g   u
--      -    cCA    C      - AG   U   c ugu 


Annotation confidence High
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Genome context
8: 69539492-69539572 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from cfa-mir-758
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-758-5p

Accession MIMAT0051957
Description Canis lupus familiaris cfa-miR-758-5p mature miRNA
Sequence 14 - AUGGUUGACCAGAGAGCACACG - 35
Evidence not_experimental

Mature cfa-miR-758-3p

Accession MIMAT0009925
Description Canis lupus familiaris cfa-miR-758-3p mature miRNA
Sequence 50 - UUUGUGACCUGGUCCACUAAC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39