Stem-loop cfa-mir-876

Accession

MI0010431

Description

Canis lupus familiaris cfa-mir-876 precursor miRNA

Sequence

993 reads, 5.0 reads per million, 47 experiments

ugaagugcugUGGAUUUCUUUGUGAAUCACCauaucuaagcuaauguggUGGUGGUUUACAAAGUAAUUCauagugcuuca
((((((((((((((((.((((((((((((((((..(.........)..)))))))))))))))).))))))))))))))))

Structure

                U                au uaa 
ugaagugcugUGGAUU CUUUGUGAAUCACCau  c   g
|||||||||||||||| ||||||||||||||||  |   c
acuucgugauaCUUAA GAAACAUUUGGUGGUg  g   u
                U                gu uaa 

Annotation confidence Medium

Genome context

11: 47771955-47772035 [-]

Mature cfa-miR-876-5p

• Accession: MIMAT0009932
• Description: Canis lupus familiaris cfa-miR-876-5p mature miRNA
• Sequence: 11 - UGGAUUUCUUUGUGAAUCACC - 31
• Evidence: experimental

Mature cfa-miR-876-3p

• Accession: MIMAT0051962
• Description: Canis lupus familiaris cfa-miR-876-3p mature miRNA
• Sequence: 50 - UGGUGGUUUACAAAGUAAUUC - 70
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39