miRBase entry: cfa-mir-764

Stem-loop cfa-mir-764


Accession
MI0010436
Description
Canis lupus familiaris cfa-mir-764 precursor miRNA


Sequence

2089 reads, 22.0 reads per million, 18 experiments
aaucuaggaggcaGGUGCUCACUUGUCCUCCUCCgugcuuggaaaauacagggAGGAGGCCAUAGUGGCAACUGUcaccaugauugauuucguugg
((((..((.(((((.(((.((((((.((((((((.((..(.....)..)).)))))))).)).))))))).))))).))..))))...........

Structure
-----------    ua  a     G   U    -  U        g  cu g 
           aauc  gg ggcaG UGC CACU UG CCUCCUCC ug  u g
           ||||  || ||||| ||| |||| || |||||||| ||  | a
           uuag  cc cUGUC ACG GUGA AC GGAGGAgg ac  a a
gguugcuuuag    ua  a     A   -    U  C        g  au a 


Annotation confidence High
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Genome context
X: 89102172-89102267 [+]

Database links

Mature cfa-miR-764-5p

Accession MIMAT0009937
Description Canis lupus familiaris cfa-miR-764-5p mature miRNA
Sequence 14 - GGUGCUCACUUGUCCUCCUCC - 34
Evidence experimental

Mature cfa-miR-764-3p

Accession MIMAT0051964
Description Canis lupus familiaris cfa-miR-764-3p mature miRNA
Sequence 54 - AGGAGGCCAUAGUGGCAACUGU - 75
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39