Stem-loop bta-mir-489

Accession

MI0010441

Description

Bos taurus bta-mir-489 precursor miRNA

Literature search

25 open access papers mention bta-mir-489
(118 sentences)

Sequence

203 reads, 11.0 reads per million, 20 experiments

guggcagcuugguggucguauguguggcgccaucuacuggaacguuuaggaGUGACAUCACAUAUAUGGCGACuaaacugcu
..(((((.(((((.(((((((((((((.(.(((...(((((...)))))..))).).))))))))))))).))))).)))))

Structure

gu     c     g             c c   cua     a 
  ggcag uuggu gucguaugugugg g cau   cugga  
  ||||| ||||| ||||||||||||| | |||   ||||| c
  ucguc aauCA CGGUAUAUACACU C GUG   gauuu  
--     a     G             A A   -ag     g 

Annotation confidence Not enough data

Genome context

4: 10822870-10822951 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-489

Mature bta-miR-489-3p

• Accession: MIMAT0009942
• Description: Bos taurus bta-miR-489-3p mature miRNA
• Sequence: 52 - GUGACAUCACAUAUAUGGCGAC - 73
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39