Stem-loop bfl-mir-2057

Accession

MI0010492

Description

Branchiostoma floridae bfl-mir-2057 precursor miRNA

Sequence

cacgggUGAGAAGUUAGCCAACCAUCCGGcugguaugugcaacccggguggugguugacuucuuucucguuacgucucaaua
.(((((.(((((((((((((.((((((((...((....))...))))))))))))))))))))).)))))............

Structure

-----------c     U             A        cug  a 
            acggg GAGAAGUUAGCCA CCAUCCGG   gu u
            ||||| ||||||||||||| ||||||||   ||  
            ugcuc uucuucaguuggu ggugggcc   cg g
auaacucugcau     u             -        caa  u 

Annotation confidence Not enough data

Genome context

GG666509.1: 856161-856242 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-2057

Mature bfl-miR-2057

• Accession: MIMAT0009983
• Description: Branchiostoma floridae bfl-miR-2057 mature miRNA
• Sequence: 7 - UGAGAAGUUAGCCAACCAUCCGG - 29
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49