Accession
MI0010500
Description
Branchiostoma floridae
bfl-mir-2013 precursor miRNA
Sequence
uuugccccugagccauugcauuugucugccuugucugugcauugagauguccaaAGCAGCAUAGUGCAAUGGUGUCAggguc
.....(((((((((((((((((((.((((.((((((........)))....))).)))))).))))))))))).))))))..
.....(((((((((((((((((((.((((.((((((........)))....))).)))))).))))))))))).))))))..
Structure
uuugc - - u c ---- gug
cccuga gccauugcauu ug cugc uug ucu c
|||||| ||||||||||| || |||| ||| |||
gggACU UGGUAACGUGA AC GACG aac aga a
---cu G U - A cugu guu
Annotation confidence
Low
Do you think this miRNA is real?
Comments
mir-2013 appears to be the cephalochordate homolog of vertebrate mir-103, and is named as such in [2].
Genome context
GG666463.1: 1075339-1075420 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bfl-mir-2013
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bfl-miR-2013
| Accession | MIMAT0009991 |
| Description | Branchiostoma floridae bfl-miR-2013 mature miRNA |
| Sequence | 55 - AGCAGCAUAGUGCAAUGGUGUCA - 77 |
| Evidence |
experimental
cloned [1], 454 [2] |
References
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