miRBase entry: bfl-mir-2066

Stem-loop bfl-mir-2066

Accession

MI0010504

Description

Branchiostoma floridae bfl-mir-2066 precursor miRNA

Gene family

MIPF0001819; mir-2066

Sequence

uggugccagcgccccugacugcugcauccugcugccuuggggaauaucaaccaccAAGCAGCAGUGUGCAGUGGUGAgggug
.((((....))))(((.((((((((((.(((((((.((((((........)).))))))))))).)))))))))).)))...

Structure

uggugccagcgcc   g          c       c    -  aau 
             ccu acugcugcau cugcugc uugg gg   a
             ||| |||||||||| ||||||| |||| ||    
             ggA UGGUGACGUG GACGACG AAcc cc   u
----------gug   G          U       -    a  aac

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

GG666480.1: 2941419-2941500 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-2066

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bfl-miR-2066

Accession	MIMAT0009994
Description	Branchiostoma floridae bfl-miR-2066 mature miRNA
Sequence	56 - AAGCAGCAGUGUGCAGUGGUGA - 77
Evidence	experimental cloned [1]

References

PubMed ID: 19196332
Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
"Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
"Evol Dev (2009) 11:41-49