miRBase entry: bfl-mir-2075

Stem-loop bfl-mir-2075


Accession
MI0010514
Description
Branchiostoma floridae bfl-mir-2075 precursor miRNA


Sequence


uugAUCUCGUCAACCUUCGUCAGAUGucugauacacugcucugacuuuucggaagcgagaagugugaugacgucaggagugaaacaaaaguggcgggaug
...(((((((((...((((((.((((((...(((((((((((((....)))).)))....))))))..))))))..)).)))).......))))))))).

Structure
uug         ----ACC    -  -A      uga      ----   -    c 
   AUCUCGUCA       UUCG UC  GAUGuc   uacacu    gcu cuga u
   |||||||||       |||| ||  ||||||   ||||||    ||| ||||  
   uagggcggu       aagu ag  cugcag   guguga    cga ggcu u
--g         gaaaaca    g  ga      -ua      agag   a    u 


Annotation confidence Not enough data
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Genome context
ref|NC_049981.1|: 12255986-12256085 [+]

Database links

Mature bfl-miR-2075-5p

Accession MIMAT0010004
Description Branchiostoma floridae bfl-miR-2075-5p mature miRNA
Sequence 4 - AUCUCGUCAACCUUCGUCAGAUG - 26
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19196332
    Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
    "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
    "Evol Dev (2009) 11:41-49