miRBase entry: bfl-let-7b

Stem-loop bfl-let-7b

Accession

MI0010517

Description

Branchiostoma floridae bfl-let-7b precursor miRNA

Sequence

guaugacccaaaaaaagguaacggguuguacagucaucuccaauguuguacuucugAACUAUACAACCUACUACCUCAccuc
...............(((((..((((((((.(((((..................)).))).))))))))..)))))......

Structure

guaugacccaaaaaa     ac        c   -  ucuccaau 
               aggua  ggguugua agu ca        g
               |||||  |||||||| ||| ||         
               UCCAU  UCCAACAU UCA gu        u
---------cuccAC     CA        A   A  cuucaugu

Annotation confidence Not enough data

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Genome context

GG666478.1: 2706003-2706084 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from bfl-let-7b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bfl-let-7b

Accession	MIMAT0010006
Description	Branchiostoma floridae bfl-let-7b mature miRNA
Sequence	57 - AACUAUACAACCUACUACCUCA - 78
Evidence	experimental cloned [1]

References

PubMed ID: 19196332
Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
"Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
"Evol Dev (2009) 11:41-49