Stem-loop bfl-mir-129a

Accession

MI0010519

Description

Branchiostoma floridae bfl-mir-129a precursor miRNA

Gene family

MIPF0000073; mir-129

Sequence

cucuccccggcgugcccuguCCUUUUUGUGGUUUGGGGCUUUUgagaugaugacagaaAAGCCCUUACCUCAAAAGGgauag
................((((((((((((.(((..(((((((((.............))))))))).))).))))))))))))

Structure

cucuccccggcgugcc            U   UU         gagau 
                cuguCCUUUUUG GGU  GGGGCUUUU     g
                |||||||||||| |||  |||||||||     a
                gauagGGAAAAC CCA  UCCCGAAaa     u
----------------            U   -U         gacag 

Annotation confidence Not enough data

Genome context

GG666487.1: 4848645-4848726 [+]

Mature bfl-miR-129a-5p

• Accession: MIMAT0010008
• Description: Branchiostoma floridae bfl-miR-129a-5p mature miRNA
• Sequence: 21 - CCUUUUUGUGGUUUGGGGCUUUU - 43
• Evidence: experimental ; 454 [2]

Mature bfl-miR-129a-3p

• Accession: MIMAT0010009
• Description: Branchiostoma floridae bfl-miR-129a-3p mature miRNA
• Sequence: 59 - AAGCCCUUACCUCAAAAGG - 77
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49