Accession
MI0010536
Description
Physcomitrella patens
ppt-MIR2082 precursor miRNA
Sequence
1481
reads,
63.0
reads per million, 10 experiments
cucguccacaucuugccgcuccagauUGUGUGUUCCGCUUCUUCUUUcgucaugcauguccuccacagaucaagcaugauagaagaagaAGCGGCUUACGCAAUCUGGGAcggagaugcaugaguucugag
(((((...(((((..(((.(((((((((((((..(((((((((((((.(((((((.((..((....))..)).))))))).)))))))))))))..))))))))))))).)))))))).))))).......
(((((...(((((..(((.(((((((((((((..(((((((((((((.(((((((.((..((....))..)).))))))).)))))))))))))..))))))))))))).)))))))).))))).......
Structure
------- cca ug c UU c a uc c
cucgu caucu ccg uccagauUGUGUG CCGCUUCUUCUUU gucaugc ug cu c
||||| ||||| ||| ||||||||||||| ||||||||||||| ||||||| || ||
gagua guaga ggc GGGUCUAACGCAU GGCGAagaagaag uaguacg ac ga a
gagucuu --c -- A UC a a ua c
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Chr21: 5914145-5914275 [-]
Database links
Mature ppt-miR2082-5p
| Accession | MIMAT0010021 |
| Description | Physcomitrella patens ppt-miR2082-5p mature miRNA |
| Sequence | 27 - UGUGUGUUCCGCUUCUUCUUU - 47 |
| Evidence |
experimental
Illumina [1] |
Mature ppt-miR2082-3p
| Accession | MIMAT0053783 |
| Description | Physcomitrella patens ppt-miR2082-3p mature miRNA |
| Sequence | 90 - AGCGGCUUACGCAAUCUGGGA - 110 |
| Evidence |
experimental
unknown |
References
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