Accession
MI0010538
Description
Physcomitrella patens
ppt-MIR1023e precursor miRNA
Sequence
acagcuuugaaugucaucauACACUCUCUCCGUUUCCCUUCcgaaucguuuuuccccucaugcacuggaaacuguuggaAGGGAAUCGGGUGGAGUGCAUcaugaucugcaagcuccgac
..(((((.(...(((((.((.((((((.((((.(((((((((((......(((((...........)))))...))))))))))).)))).)))))).)).)))))...)))))).....
..(((((.(...(((((.((.((((((.((((.(((((((((((......(((((...........)))))...))))))))))).)))).)))))).)).)))))...)))))).....
Structure
---ac u aau c A C U aucguu ccuc
agcuu g gucau au CACUCU UCCG UUCCCUUCcga uuucc a
||||| | ||||| || |||||| |||| ||||||||||| ||||| u
ucgaa c uagua UA GUGAGG GGGC AAGGGAagguu aaagg g
cagcc - guc c C U U ---guc ucac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr10: 3221227-3221346 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1023e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1023e-5p
| Accession | MIMAT0010024 |
| Description | Physcomitrella patens ppt-miR1023e-5p mature miRNA |
| Sequence | 21 - ACACUCUCUCCGUUUCCCUUC - 41 |
| Evidence |
experimental
Illumina [1] |
Mature ppt-miR1023e-3p
| Accession | MIMAT0010025 |
| Description | Physcomitrella patens ppt-miR1023e-3p mature miRNA |
| Sequence | 80 - AGGGAAUCGGGUGGAGUGCAU - 100 |
| Evidence |
experimental
Illumina [1] |
References
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