Stem-loop osa-MIR1846e

Accession

MI0010547

Description

Oryza sativa osa-MIR1846e precursor miRNA

Literature search

11 open access papers mention osa-MIR1846e
(15 sentences)

Sequence

219789 reads, 1158.0 reads per million, 142 experiments

cgcauccgccAACGAGGAGGCCGGGACCACCGGauCCGGUGACUCCGGCCUCCUCGCCggcagauccgg
((.(((.(((..(((((((((((((..(((((....)))))..)))))))))))))..))).))).)).

Structure

-  c   c   AA             AC     G 
 cg auc gcc  CGAGGAGGCCGGG  CACCG a
 || ||| |||  |||||||||||||  |||||  
 gc uag cgg  GCUCCUCCGGCCU  GUGGC u
g  c   a   CC             CA     C 

Annotation confidence High

Genome context

9: 13211437-13211505 [-]

Mature osa-miR1846e-5p

• Accession: MIMAT0010042
• Description: Oryza sativa osa-miR1846e-5p mature miRNA
• Sequence: 11 - AACGAGGAGGCCGGGACCACCGG - 33
• Evidence: experimental ; Illumina [1]

Mature osa-miR1846e-3p

• Accession: MIMAT0056101
• Description: Oryza sativa osa-miR1846e-3p mature miRNA
• Sequence: 36 - CCGGUGACUCCGGCCUCCUCGCC - 58
• Evidence: experimental ; unknown

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930