Stem-loop osa-MIR2101

Accession

MI0010561

Description

Oryza sativa osa-MIR2101 precursor miRNA

Literature search

2 open access papers mention osa-MIR2101
(2 sentences)

Sequence

ucuuaucucACAUGUUUACAAGUUAAAAUGUggagcagaggguauacaacccaaacaaguuuggcacucugaacgAUUUAACUCAAGUGAGCAUUGUgcgaggccau
.....((.(((((((((((.(((((((.(((((((((((((((.....)))).......))))...))))..))).)))))))...))))))).)))).))......

Structure

-ucuua  u    -       --A       A   --    ---    -------    a 
      uc cACA UGUUUAC   AGUUAAA UGU  ggag   caga       gggu u
      || |||| |||||||   ||||||| |||  ||||   ||||       |||| a
      ag gUGU ACGAGUG   UCAAUUU gca  ucuc   guuu       ccca c
uaccgg  c    U       AAC       A   ag    acg    gaacaaa    a 

Annotation confidence Not enough data

Genome context

Chr12: 17986691-17986797 [+]

Mature osa-miR2101-5p

• Accession: MIMAT0010066
• Description: Oryza sativa osa-miR2101-5p mature miRNA
• Sequence: 10 - ACAUGUUUACAAGUUAAAAUGU - 31
• Evidence: experimental ; Illumina [1]

Mature osa-miR2101-3p

• Accession: MIMAT0010067
• Description: Oryza sativa osa-miR2101-3p mature miRNA
• Sequence: 76 - AUUUAACUCAAGUGAGCAUUGU - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930