miRBase entry: osa-MIR2101

Dead hairpin entry

Stem-loop osa-MIR2101


Accession
MI0010561
Description
Oryza sativa osa-MIR2101 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
2 open access papers mention osa-MIR2101
(2 sentences)

Sequence

103277 reads, 737.0 reads per million, 92 experiments
ucuuaucucacauguuuacaAGUUAAAAUGUGGAGCAGAGGGUAUacaacccaaacaaguuuggcacucugAACGAUUUAACUCAAGUGAGCAUUgugcgaggccau
.....((.(((((((((((.(((((((.(((((((((((((((.....)))).......))))...))))..))).)))))))...))))))).)))).))......

Structure
-ucuua  u    -       --a       A   --    ---    -------    A 
      uc caca uguuuac   AGUUAAA UGU  GGAG   CAGA       GGGU U
      || |||| |||||||   ||||||| |||  ||||   ||||       |||| a
      ag gugU ACGAGUG   UCAAUUU GCA  ucuc   guuu       ccca c
uaccgg  c    U       AAC       A   Ag    acg    gaacaaa    a