Stem-loop osa-MIR2102

Accession

MI0010562

Description

Oryza sativa osa-MIR2102 precursor miRNA

Literature search

2 open access papers mention osa-MIR2102
(3 sentences)

Sequence

ccgaugguaGGGCAAGCCGCCGCCGCCACcaccaccgcugccaugcggaugacaaacuucuagcucuucggaucCAUGGUGCCGGUUCCGGUGGCGuccauggcgacgg
(((.((.((((((..((((((((((.(((((.((((((......)))).)).......(((........)))....))))).)))...))))))))))).)).)).)))

Structure

   a  g  -    AA       ---   C     ------------------------c  -    ug 
ccg ug ua GGGC  GCCGCCG   CCG CACca                         ca ccgc  c
||| || || ||||  |||||||   ||| |||||                         || ||||   
ggc gc gu ccuG  CGGUGGC   GGC GUGGU                         gu ggcg  c
   a  g  a    --       CUU   C     ACcuaggcuucucgaucuucaaaca  a    ua 

Annotation confidence Not enough data

Genome context

Chr5: 18250483-18250591 [+]

Mature osa-miR2102-5p

• Accession: MIMAT0010068
• Description: Oryza sativa osa-miR2102-5p mature miRNA
• Sequence: 10 - GGGCAAGCCGCCGCCGCCAC - 29
• Evidence: experimental ; Illumina [1]

Mature osa-miR2102-3p

• Accession: MIMAT0010069
• Description: Oryza sativa osa-miR2102-3p mature miRNA
• Sequence: 75 - CAUGGUGCCGGUUCCGGUGGCG - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930