Dead hairpin entry

Stem-loop osa-MIR2104

Accession

MI0010565

Description

Oryza sativa osa-MIR2104 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention osa-MIR2104
(3 sentences)

Sequence

744 reads, 5.0 reads per million, 38 experiments

acgggcgcucacgguggcuucgacccucgucucggccgcgugcGGUAGUGCGGGAGGCAUGCCGUGuguaccgGCGGCGAGGGGAUGCGAGCGUGagugccucgg
.((((((((((((.(.((.((..((((((((((((..((((((((((.(((.....))))))))))))).)))).)))))))))).)).).)))))))))).)).

Structure

a  -          g g  u  ga        -    cc          G   G 
 cg ggcgcucacg u gc uc  cccucguc ucgg  gcgugcGGUA UGC G
 || |||||||||| | || ||  |||||||| ||||  |||||||||| ||| G
 gc ccgugaGUGC A CG AG  GGGAGCGG Ggcc  uguGUGCCGU ACG A
g  u          G G  U  --        C    -a          -   G