Stem-loop osa-MIR2106

Accession

MI0010567

Description

Oryza sativa osa-MIR2106 precursor miRNA

Literature search

2 open access papers mention osa-MIR2106
(4 sentences)

Sequence

12030 reads, 90.0 reads per million, 134 experiments

UGCGAGAAGGAUGUUCCGAGAaucucguacgccggugagguuucccgugaucuggCCGAGGUUUUCUGGAUACAUUcaacgcggaa
((((....(((((((((((((((((((...(((((...((....)).....))))))))))))))).))).))))))..))))...

Structure

---    AGAA      -   -          uac     --uga  u 
   UGCG    GGAUGU UCC GAGAaucucg   gccgg     gg u
   ||||    |||||| ||| ||||||||||   |||||     ||  
   gcgc    cUUACA AGG CUUUUGGAGC   Cgguc     cc u
aag    --aa      U   U          ---     uagug  c 

Annotation confidence Low

Genome context

2: 23768609-23768694 [-]

Mature osa-miR2106-5p

• Accession: MIMAT0056108
• Description: Oryza sativa osa-miR2106-5p mature miRNA
• Sequence: 1 - UGCGAGAAGGAUGUUCCGAGA - 21
• Evidence: experimental ; unknown

Mature osa-miR2106-3p

• Accession: MIMAT0010074
• Description: Oryza sativa osa-miR2106-3p mature miRNA
• Sequence: 56 - CCGAGGUUUUCUGGAUACAUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930