Stem-loop lja-MIR396

Accession

MI0010581

Description

Lotus japonicus lja-MIR396 precursor miRNA

Sequence

guccucuuuguauucUUCCACAGCUUUCUUGAACUGcauucaauugcaugcaugccaugacacucuuauuuugcgguucaauaaagcugugggaagauauagauaggg
..(((.((((((((.((((((((((((.((((((((((......((((((.....)))).)).........)))))))))).)))))))))))).)))))))).))).

Structure

gu   c        c            C          ---uucaau  -    c 
  ccu uuuguauu UUCCACAGCUUU UUGAACUGca         ug caug a
  ||| |||||||| |||||||||||| ||||||||||         || |||| u
  gga agauauag agggugucgaaa aacuuggcgu         ac guac g
-g   u        a            u          uuuauucuc  a    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature lja-miR396

• Accession: MIMAT0010088
• Description: Lotus japonicus lja-miR396 mature miRNA
• Sequence: 16 - UUCCACAGCUUUCUUGAACUG - 36
• Evidence: not_experimental

References

1. PubMed ID: 19084500
   Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
   "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
   "Biochem Biophys Res Commun (2009) 378:799-803