Stem-loop ame-mir-1000

Accession

MI0010616

Description

Apis mellifera ame-mir-1000 precursor miRNA

Sequence

acgucgccggggAUAUUGUCUUGUCACAGCAGUacgccuuuaaagaguuacuggugugaugggacauuguccucgucccguggcccuucgu
..(((((((((((((.((((((((((((.(((((.((((....)).))))))).)))))))))))).))))))))....))))).......

Structure

-----ac     ----        U            G     c  -  u 
       gucgc    cggggAUA UGUCUUGUCACA CAGUa gc cu u
       |||||    |||||||| |||||||||||| ||||| || ||  
       cggug    gcuccugu acaggguagugu gucau ug ga a
ugcuucc     cccu        u            g     -  a  a 

Annotation confidence Low

Genome context

CM000063.5: 3662119-3662209 [-]

Mature ame-miR-1000-5p

• Accession: MIMAT0010119
• Description: Apis mellifera ame-miR-1000-5p mature miRNA
• Sequence: 13 - AUAUUGUCUUGUCACAGCAGU - 33
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670