Stem-loop bmo-mir-993b

Accession

MI0010625

Description

Bombyx mori bmo-mir-993b precursor miRNA

Literature search

2 open access papers mention bmo-mir-993b
(10 sentences)

Sequence

67844 reads, 798.0 reads per million, 34 experiments

ggcacauucgugaucUACCCUGUAGAUCCGGGCUUUCGuaaaaaacaaaucgAAAGCUCGUCUCUACAGGUAUAUcacggcuggcccacgccaccuuuucuacaauuagucaagaacug
(((.((.(((((((.((((.((((((..((((((((((............))))))))))..)))))))))).))))))).)))))........(((..(((....)))..))).....

Structure

---------------------------------   a  u       c    C      UC          uaaaa 
                                 ggc ca ucgugau UACC UGUAGA  CGGGCUUUCG     a
                                 ||| || ||||||| |||| ||||||  ||||||||||      
                                 ccg gu ggcacUA AUGG ACAUCU  GCUCGAAAgc     a
gucaagaacugauuaacaucuuuuccaccgcac   -  c       U    -      CU          uaaac 

Annotation confidence High

Genome context

dbj|BSVE01000001.1|: 20662794-20662912 [+]

Mature bmo-miR-993b-5p

• Accession: MIMAT0015297
• Description: Bombyx mori bmo-miR-993b-5p mature miRNA
• Sequence: 16 - UACCCUGUAGAUCCGGGCUUUCG - 38
• Evidence: experimental ; Illumina [2]

Mature bmo-miR-993b-3p

• Accession: MIMAT0010128
• Description: Bombyx mori bmo-miR-993b-3p mature miRNA
• Sequence: 53 - AAAGCUCGUCUCUACAGGUAUAU - 75
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148