miRBase entry: bmo-mir-993b

Stem-loop bmo-mir-993b


Accession
MI0010625
Description
Bombyx mori bmo-mir-993b precursor miRNA

Literature search
1 open access papers mention bmo-mir-993b
(4 sentences)

Sequence

418 reads, 91 reads per million, 3 experiments
ggcacauucgugaucUACCCUGUAGAUCCGGGCUUUCGuaaaaaacaaaucgAAAGCUCGUCUCUACAGGUAUAUcacggcuggcccacgccaccuuuucuacaauuagucaagaacug
(((.((.(((((((.((((.((((((..((((((((((............))))))))))..)))))))))).))))))).)))))........(((..(((....)))..))).....

Structure
---------------------------------   a  u       c    C      UC          uaaaa 
                                 ggc ca ucgugau UACC UGUAGA  CGGGCUUUCG     a
                                 ||| || ||||||| |||| ||||||  ||||||||||      
                                 ccg gu ggcacUA AUGG ACAUCU  GCUCGAAAgc     a
gucaagaacugauuaacaucuuuuccaccgcac   -  c       U    -      CU          uaaac 


Annotation confidence Not enough data
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Genome context
NW_004581721.1: 2625-2743 [-]

Database links

Mature bmo-miR-993b-5p

Accession MIMAT0015297
Description Bombyx mori bmo-miR-993b-5p mature miRNA
Sequence 16 - UACCCUGUAGAUCCGGGCUUUCG - 38
Evidence experimental
Illumina [2]
Database links

Mature bmo-miR-993b-3p

Accession MIMAT0010128
Description Bombyx mori bmo-miR-993b-3p mature miRNA
Sequence 53 - AAAGCUCGUCUCUACAGGUAUAU - 75
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148