Stem-loop bmo-mir-993a

Accession

MI0010626

Description

Bombyx mori bmo-mir-993a precursor miRNA

Literature search

1 open access papers mention bmo-mir-993a
(4 sentences)

Sequence

404 reads, 87 reads per million, 3 experiments

ggcacauucgugaUCUACCCUGUAGAUCCGGGCUUUUguagauuaauuacaucaGAAGCUCGUCUCUACAGGUAUCUcacggcuggaa
....((.((((((..((((.((((((..((((((((((..............))))))))))..))))))))))..)))))).))...

Structure

ggca  u      UC    C      UC          uagauu 
    ca ucguga  UACC UGUAGA  CGGGCUUUUg      a
    || ||||||  |||| ||||||  ||||||||||       
    gu ggcacU  AUGG ACAUCU  GCUCGAAGac      a
-aag  c      CU    -      CU          uacauu 

Annotation confidence Not enough data

Genome context

NW_004582018.1: 2433576-2433663 [+]

Mature bmo-miR-993a-5p

• Accession: MIMAT0015298
• Description: Bombyx mori bmo-miR-993a-5p mature miRNA
• Sequence: 14 - UCUACCCUGUAGAUCCGGGCUUUU - 37
• Evidence: experimental ; Illumina [2]

Mature bmo-miR-993a-3p

• Accession: MIMAT0010129
• Description: Bombyx mori bmo-miR-993a-3p mature miRNA
• Sequence: 55 - GAAGCUCGUCUCUACAGGUAUCU - 77
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148