Stem-loop bmo-mir-993a

Accession

MI0010626

Description

Bombyx mori bmo-mir-993a precursor miRNA

Literature search

2 open access papers mention bmo-mir-993a
(10 sentences)

Sequence

45079 reads, 475.0 reads per million, 34 experiments

ggcacauucgugaucUACCCUGUAGAUCCGGGCUUUuguagauuaauuacaucaGAAGCUCGUCUCUACAGGUAUCUcacggcuggaa
....((.((((((..((((.((((((..((((((((((..............))))))))))..))))))))))..)))))).))...

Structure

ggca  u      uc    C      UC          uagauu 
    ca ucguga  UACC UGUAGA  CGGGCUUUug      a
    || ||||||  |||| ||||||  ||||||||||       
    gu ggcacU  AUGG ACAUCU  GCUCGAAGac      a
-aag  c      CU    -      CU          uacauu 

Annotation confidence High

Genome context

dbj|BSVE01000006.1|: 5351033-5351120 [+]

Mature bmo-miR-993a-5p

• Accession: MIMAT0015298
• Description: Bombyx mori bmo-miR-993a-5p mature miRNA
• Sequence: 16 - UACCCUGUAGAUCCGGGCUUU - 36
• Evidence: experimental ; Illumina [2]

Mature bmo-miR-993a-3p

• Accession: MIMAT0010129
• Description: Bombyx mori bmo-miR-993a-3p mature miRNA
• Sequence: 55 - GAAGCUCGUCUCUACAGGUAUCU - 77
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148