Stem-loop sma-mir-125b

Accession

MI0010677

Description

Schistosoma mansoni sma-mir-125b precursor miRNA

Literature search

11 open access papers mention sma-mir-125b
(34 sentences)

Sequence

346728 reads, 81614.0 reads per million, 33 experiments

aUCCCUGAGACUGAUAAUUGCUCuuuuuaucaugauaagggaguuugaugagaGCAAUUAUUACUCUCAGGUGUA
...(((((((.((((((((((((((...((((.(((......))))))))))))))))))))).)))))))....

Structure

-aUC       C              uuu    u   aa 
    CCUGAGA UGAUAAUUGCUCuu   auca gau  g
    ||||||| ||||||||||||||   |||| |||   
    GGACUCU AUUAUUAACGagag   uagu uug  g
AUGU       C              ---    -   ag 

Annotation confidence High

Genome context

1: 86578327-86578401 [-]

Mature sma-miR-125b-5p

• Accession: MIMAT0010184
• Description: Schistosoma mansoni sma-miR-125b-5p mature miRNA
• Sequence: 2 - UCCCUGAGACUGAUAAUUGCUC - 23
• Evidence: not_experimental

Mature sma-miR-125b-3p

• Accession: MIMAT0053617
• Description: Schistosoma mansoni sma-miR-125b-3p mature miRNA
• Sequence: 54 - GCAAUUAUUACUCUCAGGUGUA - 75
• Evidence: not_experimental

References

1. PubMed ID: 19107204
   Identification and characterization of novel microRNAs from Schistosoma japonicum
   Xue X, Sun J, Zhang Q, Wang Z, Huang Y, Pan W
   PLoS One (2008) 3:e4034