Stem-loop ssc-mir-124a-1

Accession

MI0010680

Description

Sus scrofa ssc-mir-124a-1 precursor miRNA

Literature search

15 open access papers mention ssc-mir-124a-1
(82 sentences)

Sequence

332154 reads, 762.0 reads per million, 131 experiments

ucaagaccagacucugcccucCGUGUUCACAGCGGACCUUGAuuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAagagcggagccuacggcugcacuuga
(((((..(((.((((((.((..((((((((.(((..((((((((...........))))))))..))).))))))))..)).))))))((...)))))..)))))

Structure

     ac   ------a      c  cC        A   GA        uaau 
ucaag  cag       cucugc cu  GUGUUCAC GCG  CCUUGAuu    g
|||||  |||       |||||| ||  |||||||| |||  ||||||||    u
aguuc  guc       gaggcg ga  CGUAAGUG CGC  GGAAUuaa    c
     ac   ggcaucc      a  AC        G   AC        caua 

Annotation confidence High

Genome context

chr4: 76136453-76136557 [-]

Mature ssc-miR-124a-5p

• Accession: MIMAT0052578
• Description: Sus scrofa ssc-miR-124a-5p mature miRNA
• Sequence: 22 - CGUGUUCACAGCGGACCUUGA - 42
• Evidence: experimental ; 454 [1], Illumina [2]

Mature ssc-miR-124a-3p

• Accession: MIMAT0002156
• Description: Sus scrofa ssc-miR-124a-3p mature miRNA
• Sequence: 59 - UAAGGCACGCGGUGAAUGCCA - 79
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 19196471
   Cloning, characterization and expression analysis of porcine microRNAs
   Reddy AM, Zheng Y, Jagadeeswaran G, Macmil SL, Graham WB, Roe BA, Desilva U, Zhang W, Sunkar R
   BMC Genomics (2009) 10:65


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100