Stem-loop pvu-MIR2118

Accession

MI0010699

Description

Phaseolus vulgaris pvu-MIR2118 precursor miRNA

Literature search

3 open access papers mention pvu-MIR2118
(11 sentences)

Sequence

aagagcuuaaggaagugaugggagauggguggguugguaaaacauaagagaaugaauauuucucacucuguuUUGCCGAUUCCACCCAUUCCUAugauuuccuuugcuuccucucuuuccacucu
..((((..((((((((.(((((((.(((((((((((((((((((...(((((.......)))))....))))))))))).))))))))))))))).)))))))).))))................

Structure

--------------aa    uu        g       a        -           -uaa     ug 
                gagc  aaggaagu augggag uggguggg uugguaaaaca    gagaa  a
                ||||  |||||||| ||||||| |||||||| |||||||||||    |||||  a
                uucg  uuccuuua uAUCCUU ACCCACCU AGCCGUUuugu    cucuu  u
ucucaccuuucucucc    -u        g       -        U           cuca     ua 

Annotation confidence Not enough data

Genome context

chr7: 2635274-2635398 [+]

Mature pvu-miR2118

• Accession: MIMAT0011169
• Description: Phaseolus vulgaris pvu-miR2118 mature miRNA
• Sequence: 73 - UUGCCGAUUCCACCCAUUCCUA - 94
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19353277
   Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress
   "Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL"
   "Plant Mol Biol (2009) 70:385-401