Stem-loop pvu-MIR2119

Accession

MI0010703

Description

Phaseolus vulgaris pvu-MIR2119 precursor miRNA

Literature search

2 open access papers mention pvu-MIR2119
(4 sentences)

Sequence

aucaauguuguuacuuuuacacuuuauuuucuaugcuuuuccucuacaacucucuuuuauuuuggagaaaugaaguggauuucuacucuuugauuggagaaaaaaaguggauuucuauuuuuuucaaUCAAAGGGAGUUGUAGGGGAA
......................................(((((((((((((((((((....(((((((((....(((((..((((((.(((..........))).))))))..))))))))))))))..)))))))))))))))))))

Structure

aucaauguuguuacuuuuacacuuuauuuucuaugcuu                   uauu         ugaa     uu      c   gauu 
                                      uuccucuacaacucucuuu    uuggagaaa    gugga  ucuacu uuu    g
                                      |||||||||||||||||||    |||||||||    |||||  |||||| |||     
                                      AAGGGGAUGUUGAGGGAAA    aacuuuuuu    uaucu  agguga aaa    g
--------------------------------------                   --CU         ----     uu      a   aaga 

Annotation confidence Not enough data

Genome context

chr2: 8674179-8674326 [+]

Mature pvu-miR2119

• Accession: MIMAT0011174
• Description: Phaseolus vulgaris pvu-miR2119 mature miRNA
• Sequence: 128 - UCAAAGGGAGUUGUAGGGGAA - 148
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 19353277
   Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress
   "Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL"
   "Plant Mol Biol (2009) 70:385-401