Stem-loop osa-MIR2121a

Accession

MI0010709

Description

Oryza sativa osa-MIR2121a precursor miRNA

Literature search

1 open access papers mention osa-MIR2121a
(1 sentences)

Sequence

132 reads, 115 reads per million, 2 experiments

gugcuaaucuaucgcuccguuuuccgugcggaacacagccgcggccuuaggcuguguucccaucuaccagaugggaacucauuuccccugcacggAAAACGGAGCGGUCCAUUAGCGCGu
((((((((..(((((((((((((((((((((.((((((((.........))))))))((((((((...))))))))...........)))))))))))))))))))))..))))))))..

Structure

--        cu                     -----------------------------a        gcg 
  gugcuaau  aucgcuccguuuuccgugcgg                              acacagcc   g
  ||||||||  |||||||||||||||||||||                              ||||||||   c
  CGCGAUUA  UGGCGAGGCAAAAggcacguc                              ugugucgg   c
uG        CC                     cccuuuacucaaggguagaccaucuacccu        auu 

Annotation confidence Not enough data

Comments

Huang et al. incorrectly named this sequence miR602 in [1].

Genome context

Chr1: 16373428-16373547 [+]

Mature osa-miR2121a

• Accession: MIMAT0011180
• Description: Oryza sativa osa-miR2121a mature miRNA
• Sequence: 96 - AAAACGGAGCGGUCCAUUAGCGCG - 119
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19081140
   Heavy metal-regulated new microRNAs from rice
   "Huang SQ, Peng J, Qiu CX, Yang ZM"
   "J Inorg Biochem (2009) 103:282-287