Stem-loop osa-MIR2121b

Accession

MI0010710

Description

Oryza sativa osa-MIR2121b precursor miRNA

Sequence

115 reads, 80 reads per million, 2 experiments

gcgcuaauaagucguuucauuuugcgugcgugagaguuuucaagaaccuccugucuaaccaacccaaaauuggguuggccacguauaguccaaggaugugugugugagaugcauucauuuaugugcguugggaacucauucccuccgcacggAAAACGGAGCGGUCCAUUAGCGCGu
((((((((...(((((((.((((.((((((.(((.((((....)))))))........((((((((....)))))))).(((((((((((....))).)))))))).(((((((........)))))))(((((....)))))..)))))).)))).)))))))...))))))))..

Structure

--        aag       a    g      ugagaguuuucaagaaccuccugucuaaccaacccaaaauuggguuggc        -   c 
  gcgcuaau   ucguuuc uuuu cgugcg                                                 cacguaua guc a
  ||||||||   ||||||| |||| ||||||                                                 |||||||| |||  
  CGCGAUUA   GGCGAGG AAAA gcacgc                                                 gugugugu uag a
uG        CCU       C    g      ----------cucccuuacucaaggguugcguguauuuacuuacguaga        g   g 

Annotation confidence Not enough data

Comments

Huang et al. incorrectly named this sequence miR602 in [1].

Genome context

Chr4: 16882244-16882420 [+]

Mature osa-miR2121b

• Accession: MIMAT0011181
• Description: Oryza sativa osa-miR2121b mature miRNA
• Sequence: 153 - AAAACGGAGCGGUCCAUUAGCGCG - 176
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19081140
   Heavy metal-regulated new microRNAs from rice
   "Huang SQ, Peng J, Qiu CX, Yang ZM"
   "J Inorg Biochem (2009) 103:282-287