Stem-loop sme-mir-2152

Accession

MI0010773

Description

Schmidtea mediterranea sme-mir-2152 precursor miRNA

Sequence

cuuauucucaaacuuuaaauGGGUUCGAAGUAUGUCUCUCUUUauuggagauauauaucgaauacgaaugacuagugagccauuuuu
......((((............((((((.(((((((((.(......)))))))))).))))))............))))........

Structure

--cuuauu    aacuuuaaauGG      A         U UU 
        cuca            GUUCGA GUAUGUCUC C  U
        ||||            |||||| ||||||||| |   
        gagu            uaagcu uauauagag g  a
uuuuuacc    gaucaguaagca      a         - uu 

Annotation confidence Not enough data

Genome context

Contig2195: 49519-49605 [-]

Mature sme-miR-2152

• Accession: MIMAT0011233
• Description: Schmidtea mediterranea sme-miR-2152 mature miRNA
• Sequence: 21 - GGGUUCGAAGUAUGUCUCUCUUU - 43
• Evidence: experimental ; 454 [1], Illumina [1]

References

1. PubMed ID: 19564616
   High-resolution profiling and discovery of planarian small RNAs
   "Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N"
   "Proc Natl Acad Sci U S A (2009) 106:11546-11551