miRBase entry: sme-mir-2153

Dead hairpin entry

Stem-loop sme-mir-2153


Accession
MI0010774
Description
Schmidtea mediterranea sme-mir-2153 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

30310 reads, 590.0 reads per million, 28 experiments
uaaauuacggauuuugauuaggUAGGCAUAGUCUGUUGGUUACUucuaugaaauugaauuugaucaauAAAUCACCCUUGACCAUGGACgcgacccuaccuuuuauugaaugaaauauuucg
............((((((.(((((((....((((((.(((((......(((.(((((......)))))...)))....))))))))))).....)))))))...))))))............

Structure
uaaauuacggau      --u       -CAUA      U     CUucua   --a     au 
            uuugau   aggUAGG     GUCUGU GGUUA      uga   auuga  u
            ||||||   |||||||     |||||| |||||      |||   |||||   
            aaguua   uccaucc     CAGGUA CCAGU      ACU   uaacu  u
gcuuuauaaagu      uuu       cagcg      -     --UCCC   AAA     ag