miRBase entry: sme-mir-2171

Dead hairpin entry

Stem-loop sme-mir-2171


Accession
MI0010814
Description
Schmidtea mediterranea sme-mir-2171 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

154 reads, 3.0 reads per million, 27 experiments
gaaaacgcaacaguacaaauGUGAUGGAAAUCGCUAUUUCAaaugcucccuugagauuaugcagUGGCCGUUCAUGAUGUAAGGcauaauagaaa
......((.....((((.(((.(((((..((.((.(((((((........)))))))...)).))..))))))))..))))..))..........

Structure
----gaaaac  aacag    -a   U     AA  C  --U       aug 
          gc     uaca  auG GAUGG  AU GC   AUUUCAa   c
          ||     ||||  ||| |||||  || ||   |||||||    
          cG     AUGU  UAC UUGCC  Ug cg   uagaguu   u
aaagauaaua  ---GA    AG   -     GG  a  uau       ccc