Stem-loop dre-mir-455-2

Accession

MI0010844

Description

Danio rerio dre-mir-455-2 precursor miRNA mir-455

Gene
family

RF00709; mir-455

Literature search

1 open access papers mention dre-mir-455-2
(1 sentences)

Sequence

2312 reads, 171 reads per million, 11 experiments

aucguuguucccugaagugaggGUAUGUGCCCUUGGACUACAUUguggaggccagcaccAUGCAGUCCAUGGGCAUAUACACuuacuucauggccuacaucaaca
...(.(((.((.(((((((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))))))).))...))).)....

Structure

-auc u   --u  c         g          U      A   U   gag 
    g ugu   cc ugaagugag GUAUGUGCCC UGGACU CAU gug   g
    | |||   || ||||||||| |||||||||| |||||| ||| |||    
    c aca   gg acuucauuC CAUAUACGGG ACCUGA GUA cac   c
acaa u   ucc  u         A          U      C   c   gac 

Annotation confidence High

Genome context

chr16: 51776536-51776640 [+]

Mature dre-miR-455-2-5p

• Accession: MIMAT0011302
• Description: Danio rerio dre-miR-455-2-5p mature miRNA
• Sequence: 23 - GUAUGUGCCCUUGGACUACAUU - 44
• Evidence: experimental ; 454 [1]

Mature dre-miR-455-3p

• Accession: MIMAT0031993
• Description: Danio rerio dre-miR-455-3p mature miRNA
• Sequence: 60 - AUGCAGUCCAUGGGCAUAUACAC - 82
• Evidence: not_experimental

References

1. PubMed ID: 19397817
   Parallel DNA pyrosequencing unveils new zebrafish microRNAs
   Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA
   BMC Genomics (2009) 10:195