miRBase entry: dre-mir-2193

Stem-loop dre-mir-2193


Accession
MI0010854
Description
Danio rerio dre-mir-2193 precursor miRNA


Sequence

4 reads, 5 reads per million, 3 experiments
caaaaucuucaucaaucaugggUAUGUGUGUAUCAAUUGUGUGAAAaaauucuucacauuuauaagcaucaaacuucgaugaguaaagauuuuuauaaaaugcggccacg
.((((((((.((..(((..((((.((.((((.......(((((((.......)))))))......)))))).)))).)))..)).)))))))).................

Structure
----------------c        c  ca   au    A  U    AUCAAUU       Aa 
                 aaaaucuu au  auc  gggU UG GUGU       GUGUGAA  a
                 |||||||| ||  |||  |||| || ||||       |||||||  a
                 uuuuagaa ug  uag  uuca ac uacg       uacacuu  u
gcaccggcguaaaauau        a  ag   -c    a  -    -aauauu       cu 


Annotation confidence Not enough data
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Genome context
chr20: 48963298-48963407 [-]

Database links

Mature dre-miR-2193

Accession MIMAT0011314
Description Danio rerio dre-miR-2193 mature miRNA
Sequence 23 - UAUGUGUGUAUCAAUUGUGUGAAA - 46
Evidence experimental
454 [1]

References

  1. PubMed ID: 19397817
    Parallel DNA pyrosequencing unveils new zebrafish microRNAs
    Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA
    BMC Genomics (2009) 10:195