Stem-loop sbi-MIR160f

Accession

MI0010864

Description

Sorghum bicolor sbi-MIR160f precursor miRNA

Literature search

3 open access papers mention sbi-MIR160f
(11 sentences)

Sequence

UGCCUGGCUCCCUGAAUGCCAuccgagagaagcaaugccaucguguccauggcgugccucccgguuggcguugagggagucaugcagguugcuugcauugccucagcagc
(((.(((((((((.(((((((.(((.(((..(((.((((((.......)))))))))))).))).))))))).))))))))).))).((((((.((...))...))))))

Structure

------------------------   C         G       u   a   aa   a      cg 
                        UGC UGGCUCCCU AAUGCCA ccg gag  gca ugccau  u
                        ||| ||||||||| ||||||| ||| |||  ||| ||||||  g
                        acg acugaggga uugcggu ggc cuc  cgu gcggua  u
cgacgacuccguuacguucguugg   u         g       u   c   --   -      cc 

Annotation confidence Not enough data

Genome context

chr7: 64834676-64834785 [-]

Mature sbi-miR160f

• Accession: MIMAT0011324
• Description: Sorghum bicolor sbi-miR160f mature miRNA
• Sequence: 1 - UGCCUGGCUCCCUGAAUGCCA - 21
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556