miRBase entry: sbi-MIR169e

Stem-loop sbi-MIR169e


Accession
MI0010873
Description
Sorghum bicolor sbi-MIR169e precursor miRNA

Literature search
4 open access papers mention sbi-MIR169e
(25 sentences)

Sequence

UAGCCAAGGAUGACUUGCCGGcauuucuugggucggaugacugaguuguugagccuggggaugaacagacccggaucgacggccggccggcaagucaucuguggcuacg
((((((.(((((((((((((((......(.((((....)))).)((((((((..(((((..........))))).))))))))..))))))))))))))).))))))..

Structure
--      A               auuucuugggucggaugacuga        gc     gaug 
  UAGCCA GGAUGACUUGCCGGc                      guuguuga  cuggg    a
  |||||| |||||||||||||||                      ||||||||  |||||     
  aucggu ucuacugaacggccg                      cggcagcu  ggccc    a
gc      g               --------------------gc        -a     agac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature sbi-miR169e

Accession MIMAT0011333
Description Sorghum bicolor sbi-miR169e mature miRNA
Sequence 1 - UAGCCAAGGAUGACUUGCCGG - 21
Evidence not_experimental

References

  1. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716