Stem-loop sbi-MIR437b

Accession

MI0010903

Description

Sorghum bicolor sbi-MIR437b precursor miRNA

Literature search

3 open access papers mention sbi-MIR437b
(5 sentences)

Sequence

ucaaacuucucuaauuuugaucaauguuauacaaaaauauauuagcauauacaauacuaaauaaaagcauuaucaagacauauuucaugguagauguaaugaaauaauuugauguuucagauguuggugcauuuuucuauaaacuuggucAAAGUUAGAGAAGUUUGACUU
((((((((((((((((((((((((..(((((.((((((.(((((((((..................(((((((((.((......)).)))).)))))..(((((((......))))))).))))))))).)))))).)))))..))))))))))))))))))))))))...

Structure

---                        ug     c      a         -----auacaauacuaaauaaaa     -    a  ca 
   ucaaacuucucuaauuuugaucaa  uuaua aaaaau uauuagcau                       gcauu auca ga  u
   ||||||||||||||||||||||||  ||||| |||||| |||||||||                       ||||| |||| ||   
   AGUUUGAAGAGAUUGAAAcugguu  aauau uuuuua gugguugua                       uguag uggu cu  a
UUC                        ca     c      c         gacuuuguaguuuaauaaaguaa     a    a  uu 

Annotation confidence Not enough data

Genome context

chr1: 19748293-19748463 [+]

Mature sbi-miR437b

• Accession: MIMAT0011363
• Description: Sorghum bicolor sbi-miR437b mature miRNA
• Sequence: 151 - AAAGUUAGAGAAGUUUGACUU - 171
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556