Stem-loop sbi-MIR437g

Accession

MI0010908

Description

Sorghum bicolor sbi-MIR437g precursor miRNA

Literature search

4 open access papers mention sbi-MIR437g
(6 sentences)

Sequence

3476 reads, 179.0 reads per million, 50 experiments

cagUCAAACUUUUCUAACUUUGACuaaguuuuagagaaauauguucacguguacaaguucaaauaaaugcacuaucaagacauauuucauagagaauuuggugaaacuaguuugauguuguagauguugaugcaauuuucuauaaacuuggUCAAAGUUAGAGAAGUUUGACUuag
.(((((((((((((((((((((((((((((((((((((...(((((((((.(((((..((((((.....(((((........................)))))......))))))..))))).))).))).))).))))))).))))))))))))))))))))))))))))))...

Structure

--c                              -       aua   -   -   g     gu      -aaaug     ucaagacauau 
   agUCAAACUUUUCUAACUUUGACuaaguuu uagagaa   ugu uca cgu uacaa  ucaaau      cacua           u
   |||||||||||||||||||||||||||||| |||||||   ||| ||| ||| |||||  ||||||      |||||            
   UCAGUUUGAAGAGAUUGAAACUgguucaaa aucuuuu   acg agu gua auguu  aguuug      guggu           u
gau                              u       --a   u   u   g     gu      aucaaa     uuaagagauac 

Annotation confidence Medium

Genome context

chr1: 66620183-66620358 [-]

Mature sbi-miR437g-5p

• Accession: MIMAT0056431
• Description: Sorghum bicolor sbi-miR437g-5p mature miRNA
• Sequence: 4 - UCAAACUUUUCUAACUUUGAC - 24
• Evidence: experimental ; unknown

Mature sbi-miR437g-3p

• Accession: MIMAT0011368
• Description: Sorghum bicolor sbi-miR437g-3p mature miRNA
• Sequence: 152 - UCAAAGUUAGAGAAGUUUGACU - 173
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556