Stem-loop sbi-MIR437m

Accession

MI0010913

Description

Sorghum bicolor sbi-MIR437m precursor miRNA

Literature search

3 open access papers mention sbi-MIR437m
(5 sentences)

Sequence

gucaaacucaucuaacuuuaaacaaguuacuagaaaaaugcaccaacaucuagaauaucaaauuagcuucauuaaauuuuccacgaaaugucuugguaguguguuuauuaaacuaguauauguuaauauaauuuucuaaaaacuuggucaaAAAGUUAGAGAAGUUUGACUUag
((((((((..(((((((((...((((((..(((((((.......(((((((((..((..((((..((((((....(((((....)))))....))).)))..))))..))..))))...))))).......)))))))..)))))).....)))))))))..))))))))....

Structure

----        ca         --aaa      ac       augcacc     ---    aa  uc    ua   -   uuaa     c 
    gucaaacu  ucuaacuuu     caaguu  uagaaaa       aacau   cuag  ua  aaau  gcu uca    auuuu c
    ||||||||  |||||||||     ||||||  |||||||       |||||   ||||  ||  ||||  ||| |||    |||||  
    CAGUUUGA  AGAUUGAAA     guucaa  aucuuuu       uugua   gauc  au  uuug  uga ggu    uaaag a
gaUU        AG         aacug      aa       aauauaa     uau    aa  ua    ug   u   ucug     c 

Annotation confidence Low

Genome context

chr3: 49072062-49072235 [-]

Mature sbi-miR437m

• Accession: MIMAT0011373
• Description: Sorghum bicolor sbi-miR437m mature miRNA
• Sequence: 152 - AAAGUUAGAGAAGUUUGACUU - 172
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556