Stem-loop sbi-MIR437q

Accession

MI0010917

Description

Sorghum bicolor sbi-MIR437q precursor miRNA

Gene family

MIPF0000746; MIR437

Literature search

3 open access papers mention sbi-MIR437q
(5 sentences)

Sequence

guagucaaccuucucgaacuuugacaaguuaauagaaaaauauaauuaacaucuacgaugccaaaugaaugcaucaucaaaauaaauuuguugucguagucuuguagucaucgcugccucuuucuauagaguugguaAAAGUUAGAGAAGUUUGACUUag
..((((((.((((((.((((((..(((.((.(((((((..............((((((((.(((((...................))))).))))))))....(((((....)))))...))))))).)).)))...)))))).)))))).))))))...

Structure

-gu      c      g      -ga   g  a       -------aauauaauuaacau        c     gaaugcau 
   agucaa cuucuc aacuuu   caa uu auagaaa                     cuacgaug caaau        c
   |||||| |||||| ||||||   ||| || |||||||                     |||||||| |||||        a
   UCAGUU GAAGAG UUGAAA   guu ag uaucuuu                     gaugcugu guuua        u
gaU      U      A      aug   g  a       cuccgucgcuacugauguucu        u     aauaaaac 

Annotation confidence Not enough data

Genome context

chr6: 10928435-10928594 [-]

Mature sbi-miR437q

• Accession: MIMAT0011377
• Description: Sorghum bicolor sbi-miR437q mature miRNA
• Sequence: 138 - AAAGUUAGAGAAGUUUGACUU - 158
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556