Stem-loop sbi-MIR437t

Accession

MI0010920

Description

Sorghum bicolor sbi-MIR437t precursor miRNA

Gene family

MIPF0000746; MIR437

Literature search

3 open access papers mention sbi-MIR437t
(5 sentences)

Sequence

gucaaacuugucuaucuuugaccaaguugaaaaauauauuaacaucuacaauaucaaaugaauccacuaucgaaauauuauuuccuggugugugcaaugaauauaguuugauguagcagauguuugugcauuuuucuauaaacuuggucAAAGUUAGAGAAGUUUGACUU
(((((((((.((((.((((((((((((((((((((.(((.(((((((.(.(((((((((..((.(((((..(((((...))))).))))).))............))))))))).).))))))).))).)))))))....))))))))))))).)))).)))))))))..

Structure

--         g    u             ----       a   u       a a         ----------ga  c     uc     a 
  gucaaacuu ucua cuuugaccaaguu    gaaaaau uau aacaucu c auaucaaau            au cacua  gaaau  
  ||||||||| |||| |||||||||||||    ||||||| ||| ||||||| | |||||||||            || |||||  ||||| u
  CAGUUUGAA AGAU GAAAcugguucaa    cuuuuua gug uuguaga g uguaguuug            ug guggu  cuuua  
UU         G    U             auau       c   u       c a         auauaaguaacg  u     -c     u 

Annotation confidence Not enough data

Genome context

chr7: 5483558-5483727 [+]

Mature sbi-miR437t

• Accession: MIMAT0011380
• Description: Sorghum bicolor sbi-miR437t mature miRNA
• Sequence: 150 - AAAGUUAGAGAAGUUUGACUU - 170
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556