miRBase entry: sme-mir-2200

Dead hairpin entry

Stem-loop sme-mir-2200


Accession
MI0010951
Description
Schmidtea mediterranea sme-mir-2200 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

450 reads, 9.0 reads per million, 28 experiments
aauuuugauacaguUUGAAGACGAUUAUUAUUGAUUauuauuguugagaugauuaaaaaaUCCGAAUUCAGCUGUAUAAAAAAU
..((((.((((((((.(((..(((((....(((((((((........)))))))))..))).))..))))))))))).))))..

Structure
aa    g        U   GA  -   AUUA         auu 
  uuuu auacaguU GAA  CG AUU    UUGAUUauu   g
  |||| |||||||| |||  || |||    |||||||||    
  AAAA UAUGUCGA CUU  GC Uaa    aauuaguag   u
UA    A        -   AA  C   --aa         agu