Stem-loop sme-mir-2201

Accession

MI0010952

Description

Schmidtea mediterranea sme-mir-2201 precursor miRNA

Sequence

caugaugcugcucaAGUUACUGAAGAAGCUGAUGCUGacaaagaaguauUAUCUGAAGAAGCUGGAGCAUCcgaauagcuuuuuaau
...((((((.(...((((.((..(((...(((((((........))))))))))..)).))))).))))))................

Structure

-------------cau      g uca    A  GA   AGC       Gac 
                gaugcu c   AGUU CU  AGA   UGAUGCU   a
                |||||| |   |||| ||  |||   |||||||    
                CUACGA G   UCGA GA  UCU   AUuauga   a
uaauuuuucgauaagc      G ---    A  AG   ---       aga 

Annotation confidence Not enough data

Genome context

Contig3745: 19380-19466 [-]

Mature sme-miR-2201-5p

• Accession: MIMAT0011423
• Description: Schmidtea mediterranea sme-miR-2201-5p mature miRNA
• Sequence: 15 - AGUUACUGAAGAAGCUGAUGCUG - 37
• Evidence: experimental ; Illumina [1]

Mature sme-miR-2201-3p

• Accession: MIMAT0011424
• Description: Schmidtea mediterranea sme-miR-2201-3p mature miRNA
• Sequence: 50 - UAUCUGAAGAAGCUGGAGCAUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19553344
   Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
   "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
   "RNA (2009) 15:1483-1491