Stem-loop cel-mir-2207

Accession

MI0010955

Description

Caenorhabditis elegans cel-mir-2207 precursor miRNA

Sequence

63 reads, 1 reads per million, 11 experiments

UGUGAAUUGAGACUGUGUAUAAGaauguaaggaggagaggggccguucguaucguucgucuuAUGCACAGGCUCAAUGCACACA
((((.((((((.((((((((((((.((.((.((...(((......)))...)).)))))))))))))))).)))))).))))..

Structure

--    A      A            a  u  g  gga   gg 
  UGUG AUUGAG CUGUGUAUAAGa ug aa ga   gag  g
  |||| |||||| |||||||||||| || || ||   |||   
  ACAC UAACUC GACACGUAuucu gc uu cu   cuu  c
AC    G      G            -  -  g  aug   gc 

Annotation confidence Not enough data

Genome context

chrII: 11600300-11600383 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cel-mir-2207

Mature cel-miR-2207-5p

• Accession: MIMAT0011425
• Description: Caenorhabditis elegans cel-miR-2207-5p mature miRNA
• Sequence: 1 - UGUGAAUUGAGACUGUGUAUAAG - 23
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2207-3p

• Accession: MIMAT0011426
• Description: Caenorhabditis elegans cel-miR-2207-3p mature miRNA
• Sequence: 63 - AUGCACAGGCUCAAUGCACACA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54